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Institute for Mathematical Sciences

Computational Approaches to the Analysis of Biomolecular Sequences, Structures and Their Functions and Applications to Biotechnology and Clinical Data Studies

(23 - 27 Mar 2020)

Visitor List

Aidana Amangeldina
National University of Singapore, Singapore
Ganesh Srinivasan Anand
National University of Singapore, Singapore

Whole viral particle metastability and dynamics by HDX mass spectrometry

(Video)

Jothi Anantharajan
Experimental Drug Development Centre - A*Star, Singapore
Krithika Arumugam
Nanyang Technological University, Singapore
Benjamin Aw
Bioinformatics Institute - A*Star, singapore
Igor N. Berezovsky
Bioinformatics Institute - A*Star, Singapore
Farhan Bin Aidil
Institute of Chemical and Engineering Sciences - A*Star, SINGAPORE
Peter J. Bond
Bioinformatics Institute - A*Star, Singapore

Multiscale modelling approaches to large systems in biology: understanding infectious diseases and the host response

(Video)

Elizabeth Chia
National Supercomputing Centre Singapore - A*Star, Singapore
Kwok Pui Choi
National University of Singapore, Singapore
Jonathan Chua
National University of Singapore, Singapore
Hwa Hwa Chung
Institute of Molecular and Cell Biology - A*Star, Singapore
Vijai Anand Dharmalingam
Nanyang Technological University, Singapore
Minoli Nitin Doshi
National University of Singapore, Singapore
Frank Eisenhaber
Bioinformatics Institute - A*Star, Singapore

About the limited potential, yet instrumental role of computational biology and the target identification bottleneck due to the decline in biomolecular mechanism discovery after 2000

(Video)

Samuel Gan
Bioinformatics Institute - A*Star, Singapore

Antibody engineering, scientific phone apps, viral research, and device prototyping in APD lab

Gerhard Grüber
Nanyang Technological University, Singapore

Amino acid sequence insertions or deletions inside Mycobacterium tuberculosis’s respiratory complexes provide fitness for the pathogen and new pathways for TB-drug development

Xiaoyun Guan
Bioinformatics Institute - A*Star, Singapore
Carrie Hanae
National University of Singapore, Singapore
Yossa Dwi Hartono
National University of Singapore, Singapore
Mindia Adinda Sari Haryono
National University of Singapore, Singapore
Shin Yee Hong
Experimental Drug Development Centre - A*Star, Singapore
Mohammad Neamul Kabir
National University of Singapore, Singapore
Shruti Khare
Bioinformatics Institute - A*Star, Singapore
Edwin Khoo
Institute for Infocomm Research - A*Star, Singapore
Darius Koh
Bioinformatics Institute - A*Star, Singapore
Kaicheng Liang
Bioinformatics Institute - A*Star, Singapore

Tutorial:

Computational imaging with deep learning: biomedical focus

(Video)

Chek Shik Lim
Experimental Drug Development Centre - A*Star, Singapore
Chun Teck Lim
Bioinformatics Institute - A*Star, Singapore
Fu Lin
Biotransformation Innovation Platform - A*Star, Singapore
Hongwan Liu
Princeton University and New York University, Singapore
Alexander Lyubartsev
Stockholm University, Sweden

Multiscale modeling of macromolecular systems by structure-based coarse-graining

(Video)

Nagarajan Mallika
National University of Singapore, Signapore
Zhenyu Meng
Nanyang Technological University, Singapore
Suriya Narayanan Murugesan
National University of Singapore , Singapore
Marek Mutwil
Nanyang Technological University, Singapore

Evolutionary lessons learned from transcriptome data

(Video)

Ashwin Nelanuthala
National University of Singapore, Singapore
Jonathan Ng
Nanyang Technological University, Singapore
Justin Ng
Nanyang Technological University, Singapore
Lars Nordenskiöld
Nanyang Technological University, Singapore
Mahsa Paknezhad
Bioinformatics Institute - A*Star, Singapore

Tutorial:

Reinforcement learning and its biomedical applications

(Video)

Venkata Raghuvamsi Palur
National University of Singapore, Sinagpore
Konstantin Pervushin
Nanyang Technological University, Singapore

Abeta chaperones in Alzheimer's disease: friends or foes?

(Video)

Jia Min Phang
Institute of High Performance Computing - A*Star, Singapore
Jun Jie Poh
Bioinformatics Institute - A*Star, Singapore
Leyla Ranjbari
University of Tunku Abdul Rahman, City Campus, Malasyia
Tsz Wing Sam
National University of Singapore, Singapore
Firdaus Samsudin
Bioinformatics Institute - A*Star, Singapore

To bind or not to bind: IgM versus IgG in Pertuzumab and Trastuzumab

Amartya Sanyal
Nanyang Technological University, Singapore

3D genome: from organization to function

Swati Sinha
Bioinformatics Institute - A*Star, Singapore

Discovery of an antifungal compound BII-Rafflesfungin: a computational perspective

Chinh Tran-To Su
Bioinformatics Institute - A*Star, Singapore

A holistic view of proteins: impact on antibody engineering and drug discovery

Manu Suvarna
National University of Singapore, Singapore
Shayonendra Tagore
National University of Singapore, Singapore
Zhen Wah Tan
Bioinformatics Institute - A*Star, Singapore

Tutorial:

Modeling allostery: global protein structural changes in response to local perturbations

(Video)


Tutorial:

Capturing communities in diffusive chromatin polymers via Markov state modeling and transition path theory

(Video)

Sarala Tantirimudalige
National University of Singapore, Singapore
Wei Ven Tee
Bioinformatics Institute - A*Star, Singapore
Edmund Chun Ming Tse
University of Hong Kong, China
Nikhil Tulsian
National University of Singapore, Singapore
Varun Venkatakrishnan
National University of Singapore, Singapore
Lili Wang
National University of Singapore, Singapore
Jun Jie Wee
Nanyang Technological University, Singapore
Rohan Williams
National University of Singapore, Singapore

Sequence similarity networks: a working model for defining the 'known-unknowns' of gene function in microbiomes

Han Teng Wong
Institute of Bioengineering and Nanotechnology - A*STAR, Singapore
Lim Soon Wong
National University of Singapore, Singapore

A genome assembly quality assessment measure that integrates contiguity, completeness, and correctness

Yuezhen Xue
p53Lab - A*Star, Singapore
Shilpa Yadahalli
Bioinformatics Institute - A*Star, Singapore
Thai Yap
Experimental Drug Development Centre - A*Star, singapore
Joshua Yi Yeo
Bioinformatics Institute - A*Star, Singapoee
Melvin Yin
Bioinformatics Institute - A*Star, Singapore

Deriving structure profiles corresponding to functional loops in proteins

(Video)

Xin Ee Yong
National University of Singapore, Singapore