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Institute for Mathematical Sciences

Computational Approaches to the Analysis of Biomolecular Sequences, Structures and Their Functions and Applications to Biotechnology and Clinical Data Studies

(23 - 27 Mar 2020)

Visitor List

Ugo Bastolla
Universidad Autónoma de Madrid, Spain

Torsional model in protein dynamics, catalysis, and allostery (tentative)

Igor N. Berezovsky
A*STAR, Singapore
Peter J. Bond
Bioinformatics Institute, A*STAR, Singapore

Multiscale modelling approaches to large systems in biology: understanding infectious diseases and the host response

Gustavo Caetano-Anollés
University of Illinois at Urbana-Champaign Chicago, USA

Phylogenomic and the evolutionary rise of hierarchy and community structure in biological systems


Tutorial:

'Memory' describing evolutionary rationale


Tutorial:

Structure' defining molecular complexities


Tutorial:

Linkage' approaches to network science

Kwok Pui Choi
National University of Singapore, Singapore
Thomas Dandekar
University of Würzburg, Germany

Helpful as well as unexpected clues to reveal function in proteins

Nikolay Dokholyan
The Pennsylvania State University, USA

Molecular design for research and therapeutics

Frank Eisenhaber
A*STAR, Singapore
Ambreen Faiyaz
King Saud Bin Abdul Aziz University for Health Sciences, Saudi Arabia
Michael Galperin
National Center for Biotechnology Information, U.S. National Library of Medicine, USA

Functional annotation of microbial genomes


Tutorial:

Using COG phylogenetic patterns in comparative genome analysis


How bacteria see the world


Tutorial:

Identification of novel domains of microbal signal transduction system

Mengwei Li
Beijing Institute of Genomics, Chinese Academy of Sciences, China
Kaicheng Liang
Bioinformatics Institute, A*STAR, Singapore

Tutorial:

Computational imaging with deep learning: biomedical focus

Lanyuan Lu
Nanyang Technological University, Singapore

Constructing protein structure ensemble using solution experimental data

Alexander Lyubartsev
Stockholm University, Sweden

Multiscale modeling of macromolecular systems by structure-based coarse-graining

Lars Nordenskiöld
Nanyang Technological University, Singapore
Mahsa Paknezhad
Bioinformatics Institute, A*STAR, Singapore

Tutorial:

Reinforcement learning and its biomedical applications

Riccardo Pellarin
Institut Pasteur, France
Marianne Rooman
Université Libre de Bruxelles, Belgium

Structure-based computational approaches for large-scale predictions of protein biophysical properties (Part 1)


Structure-based computational approaches for large-scale predictions of protein biophysical properties. Application to protein design, natural evolution and disease phenotypes (Part 2)

Firdaus Samsudin
A*STAR, Singapore

To bind or not to bind: IgM versus IgG in Pertuzumab and Trastuzumab

Swati Sinha
Bioinformatics Institute, Singapore

Discovery of an antifungal compound BIIRafflesfungin: a computational perspective

Chinh Trah To Su
A*STAR, Singapore

A holistic view of proteins: impact on antibody engineering and drug discovery

Zhen Wah Tan
Bioinformatics Institute, A*STAR, Singapore

Tutorial:

Modeling allostery: global protein structural changes in response to local perturbations

Rohan Williams
National University of Singapore, Singapore

Sequence similarity networks: a working model for defining the 'known-unknowns' of gene function in microbiomes

Lim Soon Wong
National University of Singapore, Singapore

A genome assembly quality assessment measure that integrates contiguity, completeness, and correctness

Peiqi Xing
Beijing Institute of Genomics, Chinese Academy of Sciences, China
Melvin Yin
A*STAR, Singapore

Deriving structure profiles corresponding to functional loops in proteins

Louxin Zhang
National University of Singapore, Singapore
Zhang Zhang
Beijing Institute of Genomics (BIG), China

The national genomics data center: from BIG data deposition to integration to translation